EnhancerDB
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  3. rs12238996[chr1:8535304]
Enhancers that have rs12238996[chr1:8535304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12238996[chr1:8535304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8535302 8535311 ZEB1 JASPAR yes 26559665
chr1 8535303 8535313 ID4 JASPAR yes 26559666
chr1 8535303 8535313 TCF3 JASPAR yes 26559667
chr1 8535303 8535313 TCF4 JASPAR yes 26559668
chr1 8535304 8535313 SNAI2 JASPAR yes 26559669
Genes associated with rs12238996[chr1:8535304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More