EnhancerDB
  1. Home
  2. SNP
  3. rs12253617[chr10:99302299]
Enhancers that have rs12253617[chr10:99302299]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 99289199 99317595 enh13439
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12253617[chr10:99302299]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 99301740 99302400 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21452159
chr10 99301740 99302400 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107934603
chr10 99301808 99302458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21452160
chr10 99301808 99302458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107934604
chr10 99301830 99302406 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107934605
chr10 99301838 99302378 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107934607
chr10 99301858 99302322 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21452162
chr10 99301858 99302322 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107934608
chr10 99301908 99302378 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21452163
chr10 99301908 99302378 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107934609
chr10 99301912 99302368 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107934610
chr10 99301926 99302322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107934612
chr10 99301945 99302321 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21452166
chr10 99301945 99302321 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107934615
Genes associated with rs12253617[chr10:99302299], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More