EnhancerDB
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  3. rs12259553[chr10:30842595]
Enhancers that have rs12259553[chr10:30842595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30836165 30850415 enh13109
Bone Marrow (K562) Liver (HepG2) Large Intestine Esophagus Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12259553[chr10:30842595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30841997 30842655 ZBTB33 GTRD no Lung (A549) 107907066
chr10 30842061 30842817 ZNF274 GTRD no Bone Marrow (K562) 21426452
chr10 30842061 30842817 ZNF274 GTRD no Bone Marrow (K562) 107907084
chr10 30842080 30842806 ZBTB33 GTRD no Lung (A549) 107907090
chr10 30842102 30842627 ZNF143 GTRD no Epithelial (MCF-7) 21426457
chr10 30842102 30842627 ZNF143 GTRD no Epithelial (MCF-7) 107907092
chr10 30842118 30842842 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21426460
chr10 30842118 30842842 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907096
chr10 30842129 30842645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21426461
chr10 30842129 30842645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907097
chr10 30842227 30842679 ZNF143 GTRD no Epithelial (MCF-7) 21426468
chr10 30842227 30842679 ZNF143 GTRD no Epithelial (MCF-7) 107907105
chr10 30842233 30842645 ZNF143 GTRD no Epithelial (MCF-7) 21426471
chr10 30842233 30842645 ZNF143 GTRD no Epithelial (MCF-7) 107907108
chr10 30842578 30842599 ZNF263 JASPAR yes 126412225
chr10 30842587 30842595 GATA1 TRANSFAC yes 126412229
chr10 30842590 30842595 GATA1 TRANSFAC yes 126412231
chr10 30842590 30842596 GATA3 JASPAR yes 126412232
Genes associated with rs12259553[chr10:30842595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More