EnhancerDB
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  3. rs12272708[chr11:19974501]
Enhancers that have rs12272708[chr11:19974501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12272708[chr11:19974501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19972320 19974903 ZNF274 GTRD no Bone Marrow (K562) 107961390
chr11 19974494 19974504 HOXA13 JASPAR yes 37818443
chr11 19974494 19974504 HOXB13 JASPAR yes 37818444
chr11 19974494 19974504 HOXD13 JASPAR yes 37818445
chr11 19974495 19974504 CDX1 JASPAR yes 37818446
chr11 19974495 19974506 CDX2 JASPAR yes 37818447
chr11 19974500 19974512 PBX1 JASPAR yes 37818448
Genes associated with rs12272708[chr11:19974501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More