EnhancerDB
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  3. rs12282550[chr11:13112838]
Enhancers that have rs12282550[chr11:13112838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 13110005 13145006 enh28608
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12282550[chr11:13112838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 13112592 13113476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21472194
chr11 13112592 13113476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107959608
chr11 13112678 13113203 ZNF274 GTRD no Blood (GM12878) 107959609
chr11 13112709 13113134 ZNF274 GTRD no Blood (GM12878) 107959610
chr11 13112786 13113124 ZNF274 GTRD no Blood (GM12878) 107959611
chr11 13112796 13113680 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21472195
chr11 13112796 13113680 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107959612
chr11 13112827 13112848 IRF1 JASPAR yes 37502161
chr11 13112835 13113275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21472196
chr11 13112835 13113275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107959613
chr11 13112838 13112849 FOXH1 JASPAR yes 37502162
Genes associated with rs12282550[chr11:13112838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More