EnhancerDB
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  3. rs12283343[chr11:123008349]
Enhancers that have rs12283343[chr11:123008349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122987085 123025975 enh14347
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 123008344 123008427 vista11899
VISTA
Transcript factors that have rs12283343[chr11:123008349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123008188 123008824 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108004616
chr11 123008221 123008711 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108004617
chr11 123008339 123008354 TFAP2A JASPAR yes 42048616
chr11 123008339 123008354 TFAP2C JASPAR yes 42048617
chr11 123008339 123008354 TFAP2A JASPAR yes 114147369
chr11 123008339 123008354 TFAP2C JASPAR yes 114147370
chr11 123008340 123008351 TFAP2A JASPAR yes 42048618
chr11 123008340 123008351 TFAP2B JASPAR yes 42048619
chr11 123008340 123008351 TFAP2C JASPAR yes 42048620
chr11 123008340 123008351 TFAP2A JASPAR yes 114147371
chr11 123008340 123008351 TFAP2B JASPAR yes 114147372
chr11 123008340 123008351 TFAP2C JASPAR yes 114147373
chr11 123008341 123008350 TFAP2A JASPAR yes 42048621
chr11 123008341 123008350 TFAP2A JASPAR yes 114147374
chr11 123008345 123008355 NFKB1 JASPAR yes 42048622
chr11 123008345 123008355 NFKB1 JASPAR yes 114147375
chr11 123008345 123008356 NFKB1 JASPAR yes 42048623
chr11 123008345 123008356 NFKB1 JASPAR yes 114147376
chr11 123008347 123008683 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21519754
chr11 123008347 123008683 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108004618
chr11 123008349 123008358 THAP1 JASPAR yes 42048624
chr11 123008349 123008358 THAP1 JASPAR yes 114147377
chr11 123008349 123008651 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21519755
chr11 123008349 123008651 E2F1 UCSC Txn Factor no Conserved 108004619
chr11 123008349 123008651 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108004620
Genes associated with rs12283343[chr11:123008349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More