EnhancerDB
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  3. rs12302571[chr12:52610896]
Enhancers that have rs12302571[chr12:52610896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12302571[chr12:52610896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52610426 52611030 TCF7L2 GTRD no Colon (HCT116) 21546810
chr12 52610459 52611030 ZNF143 GTRD no Epithelial (MCF-7) 21546811
chr12 52610465 52610999 TCF7L2 GTRD no Colon (HCT116) 21546812
chr12 52610499 52611032 ZNF143 GTRD no Epithelial (MCF-7) 21546813
chr12 52610532 52611436 ZNF143 GTRD no Epithelial (MCF-7) 21546814
chr12 52610843 52611393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546816
chr12 52610892 52610903 FOXB1 JASPAR yes 120929313
chr12 52610893 52610901 FOXL1 JASPAR yes 120929314
chr12 52610893 52610904 FOXB1 JASPAR yes 120929315
chr12 52610894 52610905 FOXB1 JASPAR yes 120929316
chr12 52610895 52610903 FOXL1 JASPAR yes 120929317
Genes associated with rs12302571[chr12:52610896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More