EnhancerDB
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  3. rs12316510[chr12:46947100]
Enhancers that have rs12316510[chr12:46947100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 46947043 46947401 vista13240
VISTA
Transcript factors that have rs12316510[chr12:46947100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46946837 46947323 ZNF274 GTRD no Cervix (HeLa-S3) 21542430
chr12 46946837 46947323 ZNF274 GTRD no Cervix (HeLa-S3) 108027874
chr12 46946910 46947486 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027875
chr12 46946911 46947387 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542431
chr12 46946911 46947387 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027876
chr12 46946921 46947199 ZNF274 GTRD no Cervix (HeLa-S3) 21542432
chr12 46946921 46947199 ZNF274 GTRD no Cervix (HeLa-S3) 108027877
chr12 46946978 46947300 SOX2 GTRD no Neural Stem Cells (H9) 21542433
chr12 46946978 46947300 SOX2 GTRD no Neural Stem Cells (H9) 108027878
Genes associated with rs12316510[chr12:46947100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More