EnhancerDB
  1. Home
  2. SNP
  3. rs12325839[chr17:59399381]
Enhancers that have rs12325839[chr17:59399381]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12325839[chr17:59399381]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 21777324
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 108279396
chr17 59399365 59399386 ZNF263 JASPAR yes 55148143
chr17 59399372 59399382 HINFP JASPAR yes 55148145
chr17 59399372 59399383 ELK4 JASPAR yes 55148146
chr17 59399372 59399383 FLI1 JASPAR yes 55148147
chr17 59399372 59399385 ELF3 JASPAR yes 55148148
chr17 59399373 59399383 ELK1 JASPAR yes 55148149
chr17 59399373 59399383 ETV6 JASPAR yes 55148150
chr17 59399373 59399384 ELF5 JASPAR yes 55148151
chr17 59399373 59399385 EHF JASPAR yes 55148152
chr17 59399373 59399385 ELF1 JASPAR yes 55148153
chr17 59399373 59399385 ELF4 JASPAR yes 55148154
chr17 59399373 59399386 ELF1 JASPAR yes 55148155
chr17 59399373 59399387 SPI1 JASPAR yes 55148156
chr17 59399375 59399381 ETS1 JASPAR yes 55148157
chr17 59399375 59399381 SPI1 JASPAR yes 55148158
chr17 59399376 59399386 MZF1 JASPAR yes 55148159
Genes associated with rs12325839[chr17:59399381], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More