EnhancerDB
  1. Home
  2. SNP
  3. rs12328727[chr2:39644510]
Enhancers that have rs12328727[chr2:39644510]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs12328727[chr2:39644510]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39644501 39644513 PKNOX2 JASPAR yes 73199044
chr2 39644501 39644513 TGIF2 JASPAR yes 73199045
chr2 39644506 39644514 MEIS3 JASPAR yes 73199046
chr2 39644507 39644511 NFE TRANSFAC yes 73199047
Genes associated with rs12328727[chr2:39644510], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More