EnhancerDB
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  3. rs1239928[chr12:70402720]
Enhancers that have rs1239928[chr12:70402720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 70369865 70403715 enh14827
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs1239928[chr12:70402720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 70402341 70403069 ZNF143 GTRD no Epithelial (MCF-7) 21555072
chr12 70402370 70403236 ZNF274 GTRD no Cervix (HeLa-S3) 21555073
chr12 70402446 70403155 ZNF143 GTRD no Epithelial (MCF-7) 21555074
chr12 70402492 70403106 ZNF143 GTRD no Epithelial (MCF-7) 21555075
chr12 70402516 70403010 ZNF143 GTRD no Epithelial (MCF-7) 21555076
chr12 70402536 70403092 ZNF143 GTRD no Epithelial (MCF-7) 21555077
chr12 70402621 70402988 ZNF274 GTRD no Cervix (HeLa-S3) 21555078
chr12 70402641 70403070 ZNF143 GTRD no Epithelial (MCF-7) 21555079
chr12 70402666 70402953 ZNF274 GTRD no Cervix (HeLa-S3) 21555080
chr12 70402684 70403001 ZNF274 GTRD no Cervix (HeLa-S3) 21555081
chr12 70402699 70402720 IRF1 JASPAR yes 121754028
Genes associated with rs1239928[chr12:70402720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More