EnhancerDB
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Enhancers that have rs12404359[chr1:201682660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 201682596 201682901 vista4572
VISTA
Transcript factors that have rs12404359[chr1:201682660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201681995 201682675 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365185
chr1 201681995 201682675 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856843
chr1 201682291 201682941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365186
chr1 201682291 201682941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856844
chr1 201682416 201682932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365187
chr1 201682416 201682932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856845
chr1 201682422 201682952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365188
chr1 201682422 201682952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856846
chr1 201682447 201683107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365189
chr1 201682447 201683107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856847
chr1 201682460 201682844 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21365190
chr1 201682460 201682844 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856848
chr1 201682474 201683014 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856849
chr1 201682476 201683052 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856850
chr1 201682504 201682968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365191
chr1 201682504 201682968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856851
chr1 201682505 201682719 ZNF274 GTRD no Blood (GM12878) 107856852
chr1 201682505 201682989 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856853
chr1 201682508 201682818 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21365192
chr1 201682508 201682818 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107856854
chr1 201682509 201682885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365193
chr1 201682509 201682885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856855
chr1 201682527 201683011 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856856
chr1 201682529 201682925 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365194
chr1 201682529 201682925 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856857
chr1 201682536 201682816 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21365195
chr1 201682536 201682816 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107856858
chr1 201682537 201682933 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365196
chr1 201682537 201682933 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856859
chr1 201682548 201682840 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21365197
chr1 201682548 201682840 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107856860
chr1 201682551 201682927 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21365198
chr1 201682551 201682927 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107856861
chr1 201682552 201682765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365199
chr1 201682552 201682765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856862
chr1 201682563 201682903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365200
chr1 201682563 201682903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856863
chr1 201682565 201682835 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365201
chr1 201682565 201682835 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856864
chr1 201682565 201682879 FOS UCSC Txn Factor no Conserved 107856865
chr1 201682565 201683035 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21365202
chr1 201682565 201683035 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107856866
chr1 201682566 201682836 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21365203
chr1 201682566 201682836 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107856867
chr1 201682567 201682887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365204
chr1 201682567 201682887 JUND UCSC Txn Factor no Conserved 107856868
chr1 201682567 201682887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856869
chr1 201682572 201682928 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21365205
chr1 201682572 201682928 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107856870
chr1 201682574 201682818 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365206
chr1 201682574 201682818 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856871
chr1 201682579 201682839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107856872
chr1 201682579 201682869 FOSL2 UCSC Txn Factor no Conserved 107856873
chr1 201682581 201682861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365207
chr1 201682581 201682861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856874
chr1 201682585 201682815 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365208
chr1 201682585 201682815 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856875
chr1 201682588 201682869 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856876
chr1 201682589 201682845 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365209
chr1 201682589 201682845 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856877
chr1 201682593 201682853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365210
chr1 201682593 201682853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856878
chr1 201682595 201682879 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365211
chr1 201682595 201682879 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856879
chr1 201682599 201683003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365212
chr1 201682599 201683003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856880
chr1 201682603 201682883 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107856881
chr1 201682606 201682990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365213
chr1 201682606 201682990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856882
chr1 201682608 201682830 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365214
chr1 201682608 201682830 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856883
chr1 201682612 201682781 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21365215
chr1 201682612 201682781 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107856884
chr1 201682612 201682982 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365216
chr1 201682612 201682982 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856885
chr1 201682621 201682851 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365217
chr1 201682621 201682851 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856886
chr1 201682630 201682886 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21365218
chr1 201682630 201682886 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107856887
chr1 201682630 201682960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365219
chr1 201682630 201682960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107856888
chr1 201682660 201682984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21365220
chr1 201682660 201682984 CEBPB UCSC Txn Factor no Conserved 107856889
chr1 201682660 201682984 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856890
Genes associated with rs12404359[chr1:201682660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201592411 201796102 + NAV1 ENSG00000134369.11 201592411 0 Pancreas 0.0137492 1710