EnhancerDB
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  3. rs12405779[chr1:227008502]
Enhancers that have rs12405779[chr1:227008502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12405779[chr1:227008502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227008482 227008503 ZNF263 JASPAR yes 35848181
chr1 227008496 227008508 INSM1 JASPAR yes 35848183
chr1 227008500 227008509 CDX1 JASPAR yes 35848184
chr1 227008500 227008510 HOXA13 JASPAR yes 35848185
chr1 227008500 227008510 HOXB13 JASPAR yes 35848186
chr1 227008500 227008510 HOXD13 JASPAR yes 35848187
Genes associated with rs12405779[chr1:227008502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More