EnhancerDB
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  3. rs12405904[chr1:225651167]
Enhancers that have rs12405904[chr1:225651167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12405904[chr1:225651167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651064 225652472 ZNF274 GTRD no Cervix (HeLa-S3) 21384815
chr1 225651086 225654242 ZBTB33 GTRD no Brain (SK-N-SH) 21384816
chr1 225651110 225652296 ZBTB33 GTRD no Brain (SK-N-SH) 21384817
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651132 225652373 ZNF274 GTRD no Cervix (HeLa-S3) 21384818
chr1 225651149 225651170 ZNF263 JASPAR yes 35743635
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651167 225651178 E2F1 JASPAR yes 35743636
Genes associated with rs12405904[chr1:225651167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More