EnhancerDB
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  3. rs12406144[chr1:21347228]
Enhancers that have rs12406144[chr1:21347228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21337448 21356675 enh106
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12406144[chr1:21347228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21347218 21347228 GSX2 JASPAR yes 27267716
chr1 21347219 21347229 HOXB13 JASPAR yes 27267718
chr1 21347219 21347229 HOXD13 JASPAR yes 27267719
chr1 21347219 21347235 POU4F2 JASPAR yes 27267720
chr1 21347219 21347235 POU4F3 JASPAR yes 27267721
chr1 21347221 21347235 POU4F1 JASPAR yes 27267723
chr1 21347222 21347234 HNF1B JASPAR yes 27267724
Genes associated with rs12406144[chr1:21347228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More