EnhancerDB
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  3. rs12407439[chr1:22347396]
Enhancers that have rs12407439[chr1:22347396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs12407439[chr1:22347396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22347387 22347402 FOXP1 JASPAR yes 27338559
chr1 22347387 22347408 IRF1 JASPAR yes 27338560
chr1 22347388 22347403 FOXP1 JASPAR yes 27338561
chr1 22347388 22347409 IRF1 JASPAR yes 27338562
chr1 22347389 22347404 FOXP1 JASPAR yes 27338563
chr1 22347389 22347410 IRF1 JASPAR yes 27338564
chr1 22347390 22347405 FOXP1 JASPAR yes 27338565
chr1 22347391 22347406 FOXP1 JASPAR yes 27338566
chr1 22347392 22347407 FOXP1 JASPAR yes 27338567
chr1 22347393 22347408 FOXP1 JASPAR yes 27338568
chr1 22347393 22347414 IRF1 JASPAR yes 27338569
chr1 22347394 22347409 FOXP1 JASPAR yes 27338570
chr1 22347396 22347411 FOXP1 JASPAR yes 27338571
Genes associated with rs12407439[chr1:22347396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More