EnhancerDB
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  3. rs12408629[chr1:94224387]
Enhancers that have rs12408629[chr1:94224387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr1 94224034 94224429 vista2510
VISTA
Transcript factors that have rs12408629[chr1:94224387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94224233 94224463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815158
chr1 94224317 94224881 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815159
chr1 94224317 94224881 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815160
chr1 94224324 94224874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815161
chr1 94224324 94224874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815162
chr1 94224372 94224393 ZNF263 JASPAR yes 30832504
chr1 94224372 94224393 ZNF263 JASPAR yes 118331240
chr1 94224375 94224622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815163
chr1 94224375 94224622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815164
chr1 94224379 94224394 ZIC4 JASPAR yes 30832506
chr1 94224379 94224394 ZIC4 JASPAR yes 118331242
chr1 94224380 94224394 ZIC1 JASPAR yes 30832507
chr1 94224380 94224394 ZIC1 JASPAR yes 118331243
chr1 94224380 94224996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815165
chr1 94224380 94224996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815166
chr1 94224387 94224671 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815167
chr1 94224387 94224671 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815168
Genes associated with rs12408629[chr1:94224387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More