EnhancerDB
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  3. rs12408650[chr1:94224588]
Enhancers that have rs12408650[chr1:94224588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr1 94224546 94224929 vista2511
VISTA
Transcript factors that have rs12408650[chr1:94224588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94224317 94224881 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815159
chr1 94224317 94224881 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815160
chr1 94224324 94224874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815161
chr1 94224324 94224874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815162
chr1 94224375 94224622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815163
chr1 94224375 94224622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815164
chr1 94224380 94224996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815165
chr1 94224380 94224996 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815166
chr1 94224387 94224671 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815167
chr1 94224387 94224671 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815168
chr1 94224423 94224927 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815169
chr1 94224423 94224927 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815170
chr1 94224438 94224914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815171
chr1 94224447 94224887 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815172
chr1 94224452 94224812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815173
chr1 94224477 94225021 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815174
chr1 94224505 94224875 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815175
chr1 94224508 94224898 EP300 UCSC Txn Factor no Conserved 107815176
chr1 94224508 94224898 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815177
chr1 94224509 94224849 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815178
chr1 94224514 94225030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815179
chr1 94224517 94224837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815180
chr1 94224517 94224847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815181
chr1 94224535 94224791 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107815182
chr1 94224535 94224824 CEBPB UCSC Txn Factor no Conserved 107815183
chr1 94224552 94224813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815184
chr1 94224556 94224846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815185
chr1 94224558 94224788 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815186
chr1 94224563 94224839 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815187
chr1 94224570 94224846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815188
chr1 94224581 94224871 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815189
chr1 94224588 94224826 RXRA UCSC Txn Factor no Conserved 107815190
chr1 94224588 94224826 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107815191
Genes associated with rs12408650[chr1:94224588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More