EnhancerDB
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  3. rs12408715[chr1:55048942]
Enhancers that have rs12408715[chr1:55048942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12408715[chr1:55048942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55048933 55048948 STAT1 JASPAR yes 28995554
chr1 55048935 55048946 STAT1 JASPAR yes 28995555
chr1 55048935 55048946 STAT3 JASPAR yes 28995556
chr1 55048936 55048944 STAT6 TRANSFAC yes 28995557
Genes associated with rs12408715[chr1:55048942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More