EnhancerDB
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Enhancers that have rs12408780[chr1:233842247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 233837965 233846635 enh58229
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Stomach Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs12408780[chr1:233842247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 233842242 233842257 FOXA1 JASPAR yes 36236746
chr1 233842243 233842255 FOXI1 JASPAR yes 36236747
chr1 233842243 233842258 FOXP1 JASPAR yes 36236748
chr1 233842244 233842255 FOXP2 JASPAR yes 36236749
chr1 233842244 233842256 FOXC2 JASPAR yes 36236750
chr1 233842244 233842258 FOXF2 JASPAR yes 36236751
chr1 233842245 233842253 FOXG1 JASPAR yes 36236752
chr1 233842245 233842253 FOXO3 JASPAR yes 36236753
chr1 233842245 233842256 FOXB1 JASPAR yes 36236754
chr1 233842245 233842256 FOXC1 JASPAR yes 36236755
chr1 233842246 233842257 FOXA1 JASPAR yes 36236756
chr1 233842247 233842262 FOXP1 JASPAR yes 36236757
chr1 233842247 233842268 IRF1 JASPAR yes 36236758
Genes associated with rs12408780[chr1:233842247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More