EnhancerDB
  1. Home
  2. SNP
  3. rs12409305[chr1:172910363]
Enhancers that have rs12409305[chr1:172910363]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs12409305[chr1:172910363]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172908955 172910460 ZBTB33 GTRD no Brain (SK-N-SH) 21350708
chr1 172909137 172910482 ZNF274 GTRD no Cervix (HeLa-S3) 21350709
chr1 172909220 172910536 ZBTB33 GTRD no Brain (SK-N-SH) 21350710
chr1 172909280 172910424 ZBTB33 GTRD no Brain (SK-N-SH) 21350711
chr1 172909293 172910495 ZBTB33 GTRD no Brain (SK-N-SH) 21350712
chr1 172909349 172910423 ZBTB33 GTRD no Brain (SK-N-SH) 21350714
chr1 172909377 172910493 ZNF274 GTRD no Bone Marrow (K562) 21350715
chr1 172909391 172910492 ZBTB33 GTRD no Brain (SK-N-SH) 21350716
chr1 172909407 172910474 ZBTB33 GTRD no Brain (SK-N-SH) 21350717
chr1 172909424 172910507 ZBTB33 GTRD no Brain (SK-N-SH) 21350718
chr1 172909519 172910401 ZBTB33 GTRD no Brain (SK-N-SH) 21350720
chr1 172909570 172910366 ZBTB33 GTRD no Brain (SK-N-SH) 21350722
chr1 172909597 172910491 ZNF274 GTRD no Bone Marrow (K562) 21350723
chr1 172909835 172910372 ZNF274 GTRD no Bone Marrow (K562) 21350731
chr1 172910360 172910381 ZNF263 JASPAR yes 33169284
Genes associated with rs12409305[chr1:172910363], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More