EnhancerDB
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  3. rs12409441[chr1:41345082]
Enhancers that have rs12409441[chr1:41345082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41333905 41349008 enh11777
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs12409441[chr1:41345082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41345071 41345092 IRF1 JASPAR yes 28349645
chr1 41345075 41345090 IRF9 JASPAR yes 28349646
chr1 41345082 41345101 RFX2 JASPAR yes 28349647
Genes associated with rs12409441[chr1:41345082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More