EnhancerDB
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  3. rs1241229[chr12:116947891]
Enhancers that have rs1241229[chr12:116947891]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs1241229[chr12:116947891]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116947577 116948040 TCF7L2 GTRD no Colon (HCT116) 21577146
chr12 116947818 116948054 ZNF143 GTRD no Epithelial (MCF-7) 21577147
chr12 116947887 116947905 IRF2 JASPAR yes 124004884
chr12 116947888 116947893 GATA2 JASPAR yes 124004885
Genes associated with rs1241229[chr12:116947891], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More