EnhancerDB
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  3. rs12444852[chr16:68793399]
Enhancers that have rs12444852[chr16:68793399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs12444852[chr16:68793399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68793380 68793401 IRF1 JASPAR yes 11223559
chr16 68793384 68793405 IRF1 JASPAR yes 11223564
chr16 68793385 68793400 FOXP1 JASPAR yes 11223565
chr16 68793385 68793406 IRF1 JASPAR yes 11223566
chr16 68793386 68793407 IRF1 JASPAR yes 11223567
chr16 68793387 68793402 FOXP1 JASPAR yes 11223568
chr16 68793389 68793404 FOXP1 JASPAR yes 11223569
chr16 68793390 68793405 FOXP1 JASPAR yes 11223570
chr16 68793390 68793410 RREB1 JASPAR yes 11223571
chr16 68793390 68793411 IRF1 JASPAR yes 11223572
chr16 68793391 68793406 FOXP1 JASPAR yes 11223573
chr16 68793391 68793411 RREB1 JASPAR yes 11223574
chr16 68793392 68793407 FOXP1 JASPAR yes 11223575
chr16 68793393 68793408 FOXP1 JASPAR yes 11223576
chr16 68793396 68793411 MEF2C JASPAR yes 11223577
Genes associated with rs12444852[chr16:68793399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More