EnhancerDB
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Enhancers that have rs12447543[chr16:17474836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17466580 17495935 enh3923
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Adrenal Blood (Karpas-422) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
chr16 17474516 17474881 vista22047
VISTA
Transcript factors that have rs12447543[chr16:17474836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17473701 17475636 ZNF274 GTRD no Blood (GM12878) 21694757
chr16 17473701 17475636 ZNF274 GTRD no Blood (GM12878) 108186024
chr16 17473701 17475636 ZNF274 GTRD no Blood (GM12878) 108186025
chr16 17473743 17474906 ZBTB33 GTRD no Brain (SK-N-SH) 21694759
chr16 17473743 17474906 ZBTB33 GTRD no Brain (SK-N-SH) 108186027
chr16 17473869 17475661 ZNF274 GTRD no Blood (GM12878) 21694765
chr16 17473869 17475661 ZNF274 GTRD no Blood (GM12878) 108186033
chr16 17473869 17475661 ZNF274 GTRD no Blood (GM12878) 108186034
chr16 17473875 17475591 ZNF274 GTRD no Blood (GM12878) 21694766
chr16 17473875 17475591 ZNF274 GTRD no Blood (GM12878) 108186035
chr16 17473875 17475591 ZNF274 GTRD no Blood (GM12878) 108186036
chr16 17473970 17474991 ZNF274 GTRD no Blood (GM12878) 21694770
chr16 17473970 17474991 ZNF274 GTRD no Blood (GM12878) 108186040
chr16 17473970 17474991 ZNF274 GTRD no Blood (GM12878) 108186041
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 21694771
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 108186042
chr16 17474060 17475699 ZNF274 GTRD no Blood (GM12878) 108186043
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 21694772
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 108186044
chr16 17474128 17475681 ZNF274 GTRD no Blood (GM12878) 108186045
chr16 17474150 17475650 ZNF274 GTRD no Blood (GM12878) 21694773
chr16 17474150 17475650 ZNF274 GTRD no Blood (GM12878) 108186046
chr16 17474150 17475650 ZNF274 GTRD no Blood (GM12878) 108186047
chr16 17474309 17474922 ZNF274 GTRD no Blood (GM12878) 21694774
chr16 17474309 17474922 ZNF274 GTRD no Blood (GM12878) 108186048
chr16 17474349 17474924 ZNF274 GTRD no Blood (GM12878) 21694775
chr16 17474349 17474924 ZNF274 GTRD no Blood (GM12878) 108186049
chr16 17474400 17474902 ZNF274 GTRD no Blood (GM12878) 21694776
chr16 17474400 17474902 ZNF274 GTRD no Blood (GM12878) 108186050
chr16 17474404 17475000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21694777
chr16 17474404 17475000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108186051
chr16 17474404 17475000 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108186052
chr16 17474420 17474838 ZNF143 GTRD no Epithelial (MCF-7) 21694778
chr16 17474420 17474838 ZNF143 GTRD no Epithelial (MCF-7) 108186053
chr16 17474425 17475032 ZNF274 GTRD no Blood (GM12878) 21694779
chr16 17474425 17475032 ZNF274 GTRD no Blood (GM12878) 108186054
chr16 17474425 17475032 ZNF274 GTRD no Blood (GM12878) 108186055
chr16 17474468 17474864 CTCF GTRD no Spleen 21694780
chr16 17474468 17474864 CTCF GTRD no Spleen 108186056
chr16 17474492 17474930 ZNF143 GTRD no Epithelial (MCF-7) 21694781
chr16 17474492 17474930 ZNF143 GTRD no Epithelial (MCF-7) 108186057
chr16 17474505 17474921 ZNF143 GTRD no Epithelial (MCF-7) 21694782
chr16 17474505 17474921 ZNF143 GTRD no Epithelial (MCF-7) 108186058
chr16 17474800 17475153 ZNF274 GTRD no Blood (GM12878) 21694785
chr16 17474800 17475153 ZNF274 GTRD no Blood (GM12878) 108186063
chr16 17474800 17475153 ZNF274 GTRD no Blood (GM12878) 108186064
chr16 17474829 17474845 SOX4 JASPAR yes 9803261
chr16 17474829 17474845 SOX4 JASPAR yes 49350479
chr16 17474830 17474845 SOX21 JASPAR yes 9803262
chr16 17474830 17474845 SOX21 JASPAR yes 49350480
Genes associated with rs12447543[chr16:17474836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More