EnhancerDB
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  3. rs12450000[chr17:39061249]
Enhancers that have rs12450000[chr17:39061249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12450000[chr17:39061249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39060960 39061250 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757162
chr17 39061038 39061697 ZBTB33 GTRD no Lung (A549) 21757164
chr17 39061084 39061523 ZNF143 GTRD no Epithelial (MCF-7) 21757165
chr17 39061086 39061362 ZNF274 GTRD no Liver (HepG2) 21757166
chr17 39061088 39061556 ZNF143 GTRD no Epithelial (MCF-7) 21757167
chr17 39061141 39061509 ZNF143 GTRD no Epithelial (MCF-7) 21757168
chr17 39061187 39061370 ZNF274 GTRD no Cervix (HeLa-S3) 21757169
chr17 39061209 39061337 ZNF274 GTRD no Liver (HepG2) 21757170
Genes associated with rs12450000[chr17:39061249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More