EnhancerDB
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  3. rs12450816[chr17:39807850]
Enhancers that have rs12450816[chr17:39807850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 39807728 39808143 vista24791
VISTA
Transcript factors that have rs12450816[chr17:39807850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39807793 39808169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758043
chr17 39807793 39808169 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259199
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758044
chr17 39807813 39808473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259200
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758045
chr17 39807818 39808274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259201
chr17 39807840 39807855 ZIC3 JASPAR yes 21238756
chr17 39807840 39807855 ZIC4 JASPAR yes 21238757
chr17 39807840 39807855 ZIC3 JASPAR yes 54268575
chr17 39807840 39807855 ZIC4 JASPAR yes 54268576
chr17 39807841 39807855 ZIC1 JASPAR yes 21238758
chr17 39807841 39807855 ZIC1 JASPAR yes 54268577
chr17 39807847 39807858 E2F6 JASPAR yes 21238759
chr17 39807847 39807858 E2F6 JASPAR yes 54268578
chr17 39807848 39807862 PLAG1 JASPAR yes 21238760
chr17 39807848 39807862 PLAG1 JASPAR yes 54268579
Genes associated with rs12450816[chr17:39807850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More