EnhancerDB
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  3. rs12455293[chr18:56452046]
Enhancers that have rs12455293[chr18:56452046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56442885 56463415 enh17747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Breast Spleen Uterus Heart
Transcript factors that have rs12455293[chr18:56452046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56451905 56452375 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21824362
chr18 56452039 56452048 HIC2 JASPAR yes 110976551
chr18 56452040 56452053 TFAP2A JASPAR yes 110976552
chr18 56452040 56452053 TFAP2B JASPAR yes 110976553
chr18 56452040 56452053 TFAP2C JASPAR yes 110976554
Genes associated with rs12455293[chr18:56452046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More