EnhancerDB
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  3. rs12471227[chr2:30624016]
Enhancers that have rs12471227[chr2:30624016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs12471227[chr2:30624016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30624004 30624018 PAX6 JASPAR yes 72765325
chr2 30624012 30624022 RELA JASPAR yes 72765326
chr2 30624012 30624022 REL JASPAR yes 72765327
chr2 30624012 30624023 NFKB1 JASPAR yes 72765328
Genes associated with rs12471227[chr2:30624016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More