EnhancerDB
  1. Home
  2. SNP
  3. rs12476009[chr2:232492342]
Enhancers that have rs12476009[chr2:232492342]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12476009[chr2:232492342]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232492335 232492355 RREB1 JASPAR yes 81728168
chr2 232492338 232492358 RREB1 JASPAR yes 81728169
chr2 232492341 232492356 FOXP1 JASPAR yes 81728170
chr2 232492341 232492362 IRF1 JASPAR yes 81728171
Genes associated with rs12476009[chr2:232492342], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More