EnhancerDB
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  3. rs12477988[chr2:25837917]
Enhancers that have rs12477988[chr2:25837917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12477988[chr2:25837917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25837903 25837918 SOX21 JASPAR yes 72490587
chr2 25837911 25837922 RUNX1 JASPAR yes 72490591
chr2 25837913 25837922 RUNX2 JASPAR yes 72490592
chr2 25837914 25837931 RXRA JASPAR yes 72490593
chr2 25837915 25837930 RFX5 JASPAR yes 72490594
Genes associated with rs12477988[chr2:25837917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More