EnhancerDB
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  3. rs12478190[chr2:26222058]
Enhancers that have rs12478190[chr2:26222058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12478190[chr2:26222058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26222039 26222060 IRF1 JASPAR yes 72514621
chr2 26222039 26222060 ZNF263 JASPAR yes 72514622
chr2 26222040 26222061 ZNF263 JASPAR yes 72514623
chr2 26222043 26222064 ZNF263 JASPAR yes 72514624
chr2 26222044 26222065 ZNF263 JASPAR yes 72514625
chr2 26222047 26222068 ZNF263 JASPAR yes 72514626
chr2 26222048 26222069 ZNF263 JASPAR yes 72514627
chr2 26222051 26222072 ZNF263 JASPAR yes 72514628
chr2 26222052 26222073 ZNF263 JASPAR yes 72514629
chr2 26222054 26222059 ETS2 TRANSFAC yes 72514630
chr2 26222055 26222076 ZNF263 JASPAR yes 72514631
chr2 26222056 26222064 EHF JASPAR yes 72514632
chr2 26222056 26222077 ZNF263 JASPAR yes 72514633
chr2 26222058 26222063 ETS2 TRANSFAC yes 72514634
Genes associated with rs12478190[chr2:26222058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More