EnhancerDB
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  3. rs12478925[chr2:30643537]
Enhancers that have rs12478925[chr2:30643537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs12478925[chr2:30643537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30643522 30643537 MEF2A JASPAR yes 72768340
chr2 30643523 30643538 MEF2C JASPAR yes 72768342
chr2 30643528 30643544 POU4F3 JASPAR yes 72768347
chr2 30643530 30643538 FOXL1 JASPAR yes 72768348
chr2 30643534 30643538 TEAD2 TRANSFAC yes 72768349
Genes associated with rs12478925[chr2:30643537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More