EnhancerDB
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  3. rs12489569[chr3:176865688]
Enhancers that have rs12489569[chr3:176865688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12489569[chr3:176865688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176865677 176865692 HNF1A JASPAR yes 7839240
chr3 176865681 176865690 VENTX JASPAR yes 7839241
chr3 176865681 176865691 ESX1 JASPAR yes 7839242
chr3 176865681 176865691 GBX2 JASPAR yes 7839243
chr3 176865681 176865691 RAX JASPAR yes 7839244
chr3 176865682 176865690 BARX1 JASPAR yes 7839245
chr3 176865686 176865700 PAX6 JASPAR yes 7839246
chr3 176865687 176865690 MYB TRANSFAC yes 7839247
Genes associated with rs12489569[chr3:176865688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More