-
Home
- SNP
- rs12492146[chr3:56906190]
Enhancers that have rs12492146[chr3:56906190]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr3 |
56877665 |
56906735 |
enh35421 |
|
|
Transcript factors that have rs12492146[chr3:56906190]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr3
|
56906177
|
56906191
|
IRF7
|
JASPAR
|
yes
|
|
2606518
|
|
|
chr3
|
56906188
|
56906192
|
LFA1
|
TRANSFAC
|
yes
|
|
2606519
|
|
Genes associated with rs12492146[chr3:56906190], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr3
|
57094469
|
57109460
|
+
|
SPATA12
|
ENSG00000186451.1
|
57094469
|
188279
|
Esophagus
|
0.0623992
|
3786
|
|
|
chr3
|
57542003
|
57552571
|
+
|
PDE12
|
ENSG00000174840.8
|
57542003
|
635813
|
Heart
|
0.378528
|
3792
|
|
|
chr3
|
57542003
|
57552571
|
+
|
PDE12
|
ENSG00000174840.8
|
57542003
|
635813
|
Uterus
|
0.107744
|
3792
|
|