EnhancerDB
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  3. rs12492573[chr3:149102170]
Enhancers that have rs12492573[chr3:149102170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149097815 149115835 enh21019
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Heart
Transcript factors that have rs12492573[chr3:149102170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149102160 149102178 ESR1 JASPAR yes 6488723
chr3 149102164 149102174 SREBF1 JASPAR yes 6488724
chr3 149102164 149102174 SREBF2 JASPAR yes 6488725
chr3 149102165 149102173 MGA JASPAR yes 6488726
chr3 149102170 149102181 FLI1 JASPAR yes 6488727
Genes associated with rs12492573[chr3:149102170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 149086809 149095652 - TM4SF1 ENSG00000169908.6 149095652 6518 Esophagus 0.0142353 4174