EnhancerDB
  1. Home
  2. SNP
  3. rs12493788[chr3:148665332]
Enhancers that have rs12493788[chr3:148665332]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 148662845 148680575 enh35971
Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Pancreas (Panc1) Uterus Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs12493788[chr3:148665332]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 148665329 148665340 CDX2 JASPAR yes 6462658
chr3 148665330 148665341 HOXA10 JASPAR yes 6462659
chr3 148665330 148665341 HOXC11 JASPAR yes 6462660
chr3 148665330 148665341 HOXC12 JASPAR yes 6462661
chr3 148665330 148665341 HOXC13 JASPAR yes 6462662
chr3 148665330 148665341 HOXD12 JASPAR yes 6462663
chr3 148665331 148665340 CDX1 JASPAR yes 6462664
chr3 148665331 148665341 HOXC10 JASPAR yes 6462665
chr3 148665331 148665341 HOXD11 JASPAR yes 6462666
Genes associated with rs12493788[chr3:148665332], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More