EnhancerDB
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  3. rs12519780[chr5:148292686]
Enhancers that have rs12519780[chr5:148292686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
chr5 148292484 148292904 vista49575
VISTA
Transcript factors that have rs12519780[chr5:148292686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148292610 148292986 YY1 UCSC Txn Factor no Conserved 108536881
chr5 148292647 148292962 STAT3 UCSC Txn Factor no Conserved 108536882
chr5 148292681 148292937 FOS UCSC Txn Factor no Conserved 108536883
chr5 148292684 148292699 TFAP2C JASPAR yes 66773001
chr5 148292684 148292699 TFAP2C JASPAR yes 70735328
Genes associated with rs12519780[chr5:148292686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More