EnhancerDB
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  3. rs12524988[chr6:107166281]
Enhancers that have rs12524988[chr6:107166281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12524988[chr6:107166281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107166267 107166281 POU4F1 JASPAR yes 104061234
chr6 107166267 107166282 HNF1A JASPAR yes 104061235
chr6 107166273 107166284 PHOX2A JASPAR yes 104061237
chr6 107166273 107166284 PROP1 JASPAR yes 104061238
chr6 107166275 107166290 FOXP1 JASPAR yes 104061239
Genes associated with rs12524988[chr6:107166281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More