EnhancerDB
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  3. rs1254394[chr3:123316411]
Enhancers that have rs1254394[chr3:123316411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs1254394[chr3:123316411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123316399 123316412 NR2F1 JASPAR yes 5328283
chr3 123316402 123316419 RARA JASPAR yes 5328284
chr3 123316402 123316419 RXRA JASPAR yes 5328285
Genes associated with rs1254394[chr3:123316411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More