EnhancerDB
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  3. rs12562207[chr1:16508059]
Enhancers that have rs12562207[chr1:16508059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12562207[chr1:16508059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16507967 16508507 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107802227
chr1 16508041 16508060 RFX2 JASPAR yes 27032237
chr1 16508046 16508065 PAX5 JASPAR yes 27032238
Genes associated with rs12562207[chr1:16508059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More