EnhancerDB
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  3. rs12562486[chr1:110438807]
Enhancers that have rs12562486[chr1:110438807]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 110438276 110438910 vista2882
VISTA
Transcript factors that have rs12562486[chr1:110438807]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110438190 110438840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328381
chr1 110438190 110438840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820547
chr1 110438270 110438930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328382
chr1 110438270 110438930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820548
chr1 110438314 110438930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328383
chr1 110438314 110438930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820549
chr1 110438366 110438962 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21328385
chr1 110438366 110438962 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107820551
chr1 110438366 110438962 TCF7L2 UCSC Txn Factor no Conserved 107820552
chr1 110438399 110438809 FOSL2 UCSC Txn Factor no Conserved 107820558
chr1 110438399 110438809 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107820559
chr1 110438428 110438944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328394
chr1 110438428 110438944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820566
chr1 110438431 110438847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328395
chr1 110438431 110438847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820567
chr1 110438438 110438914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328397
chr1 110438438 110438914 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820569
chr1 110438443 110438899 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328398
chr1 110438443 110438899 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820570
chr1 110438456 110438846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328401
chr1 110438456 110438846 EP300 UCSC Txn Factor no Conserved 107820573
chr1 110438456 110438846 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820574
chr1 110438462 110438812 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328404
chr1 110438462 110438812 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820577
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 21328407
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 107820580
chr1 110438467 110440483 ZNF274 GTRD no Bone Marrow (K562) 107820581
chr1 110438469 110438859 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328408
chr1 110438469 110438859 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820582
chr1 110438469 110439129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328409
chr1 110438469 110439129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820583
chr1 110438489 110438825 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328414
chr1 110438489 110438825 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820589
chr1 110438498 110438934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328420
chr1 110438498 110438934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820596
chr1 110438502 110438878 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107820597
chr1 110438514 110438894 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328424
chr1 110438514 110438894 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820603
chr1 110438531 110438971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328427
chr1 110438531 110438971 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820606
chr1 110438611 110438831 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328440
chr1 110438611 110438831 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820621
chr1 110438614 110439014 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328441
chr1 110438614 110439014 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820622
chr1 110438627 110439023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328442
chr1 110438627 110439023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820623
chr1 110438631 110439031 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328443
chr1 110438631 110439031 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820624
chr1 110438674 110439268 ZNF274 GTRD no Bone Marrow (K562) 21328444
chr1 110438674 110439268 ZNF274 GTRD no Bone Marrow (K562) 107820625
chr1 110438679 110438875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328445
chr1 110438679 110438875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820626
chr1 110438683 110439119 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328446
chr1 110438683 110439119 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820627
chr1 110438684 110439576 ZNF274 GTRD no Bone Marrow (K562) 21328447
chr1 110438684 110439576 ZNF274 GTRD no Bone Marrow (K562) 107820628
chr1 110438687 110439613 ZNF274 GTRD no Bone Marrow (K562) 21328448
chr1 110438687 110439613 ZNF274 GTRD no Bone Marrow (K562) 107820629
chr1 110438688 110438893 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328449
chr1 110438688 110438893 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820630
chr1 110438720 110439445 ZNF274 GTRD no Bone Marrow (K562) 21328450
chr1 110438720 110439445 ZNF274 GTRD no Bone Marrow (K562) 107820631
chr1 110438740 110439415 ZNF274 GTRD no Bone Marrow (K562) 21328451
chr1 110438740 110439415 ZNF274 GTRD no Bone Marrow (K562) 107820632
chr1 110438743 110439496 ZNF274 GTRD no Bone Marrow (K562) 21328452
chr1 110438743 110439496 ZNF274 GTRD no Bone Marrow (K562) 107820633
chr1 110438752 110439572 ZNF274 GTRD no Bone Marrow (K562) 21328453
chr1 110438752 110439572 ZNF274 GTRD no Bone Marrow (K562) 107820634
chr1 110438770 110439291 ZNF274 GTRD no Bone Marrow (K562) 21328454
chr1 110438770 110439291 ZNF274 GTRD no Bone Marrow (K562) 107820635
chr1 110438787 110439337 ZNF274 GTRD no Bone Marrow (K562) 21328455
chr1 110438787 110439337 ZNF274 GTRD no Bone Marrow (K562) 107820636
chr1 110438790 110439400 ZNF274 GTRD no Bone Marrow (K562) 21328456
chr1 110438790 110439400 ZNF274 GTRD no Bone Marrow (K562) 107820637
chr1 110438793 110438807 CREB3L1 JASPAR yes 31451385
chr1 110438793 110438807 CREB3L1 JASPAR yes 118348423
chr1 110438799 110438807 UEF1 TRANSFAC yes 31451392
chr1 110438799 110438807 UEF1 TRANSFAC yes 118348430
chr1 110438800 110438808 MEIS2 JASPAR yes 31451393
chr1 110438800 110438808 MEIS3 JASPAR yes 31451394
chr1 110438800 110438808 MEIS2 JASPAR yes 118348431
chr1 110438800 110438808 MEIS3 JASPAR yes 118348432
chr1 110438806 110439421 ZNF274 GTRD no Bone Marrow (K562) 21328457
chr1 110438806 110439421 ZNF274 GTRD no Bone Marrow (K562) 107820638
Genes associated with rs12562486[chr1:110438807], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More