EnhancerDB
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  3. rs12562901[chr1:2211644]
Enhancers that have rs12562901[chr1:2211644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs12562901[chr1:2211644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2211639 2211654 MEF2C JASPAR yes 26231150
chr1 2211641 2211656 FOXP1 JASPAR yes 26231151
chr1 2211642 2211657 FOXP1 JASPAR yes 26231152
chr1 2211643 2211649 TBP TRANSFAC yes 26231153
chr1 2211643 2211658 FOXP1 JASPAR yes 26231154
Genes associated with rs12562901[chr1:2211644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More