EnhancerDB
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  3. rs12563381[chr1:55048240]
Enhancers that have rs12563381[chr1:55048240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12563381[chr1:55048240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55048228 55048241 ELF1 JASPAR yes 28995461
chr1 55048228 55048242 STAT1 JASPAR yes 28995462
chr1 55048230 55048241 ETV2 JASPAR yes 28995463
chr1 55048231 55048241 ERG JASPAR yes 28995464
chr1 55048231 55048241 ETS1 JASPAR yes 28995465
chr1 55048231 55048241 FLI1 JASPAR yes 28995466
chr1 55048231 55048242 ELK4 JASPAR yes 28995467
chr1 55048231 55048242 FLI1 JASPAR yes 28995468
Genes associated with rs12563381[chr1:55048240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More