EnhancerDB
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  3. rs12564190[chr1:232771914]
Enhancers that have rs12564190[chr1:232771914]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs12564190[chr1:232771914]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232771903 232771915 DBP JASPAR yes 36180528
chr1 232771903 232771915 HLF JASPAR yes 36180529
chr1 232771903 232771915 TEF JASPAR yes 36180530
chr1 232771905 232771916 NFIL3 JASPAR yes 36180531
Genes associated with rs12564190[chr1:232771914], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More