EnhancerDB
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  3. rs12565152[chr1:180494888]
Enhancers that have rs12565152[chr1:180494888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs12565152[chr1:180494888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180494227 180494903 ZBTB33 GTRD no Lung (A549) 107847810
chr1 180494292 180494979 ZNF274 GTRD no Bone Marrow (K562) 21353350
chr1 180494292 180494979 ZNF274 GTRD no Bone Marrow (K562) 107847811
chr1 180494404 180494919 ZNF274 GTRD no Bone Marrow (K562) 21353353
chr1 180494404 180494919 ZNF274 GTRD no Bone Marrow (K562) 107847814
chr1 180494410 180495035 ZNF274 GTRD no Blood (GM12878) 107847816
chr1 180494877 180494889 PBX1 JASPAR yes 33521190
Genes associated with rs12565152[chr1:180494888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More