EnhancerDB
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  3. rs12565333[chr1:178636273]
Enhancers that have rs12565333[chr1:178636273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12565333[chr1:178636273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178636262 178636275 NFKB1 JASPAR yes 33436093
chr1 178636262 178636283 IRF1 JASPAR yes 33436094
chr1 178636264 178636275 ELK4 JASPAR yes 33436095
chr1 178636265 178636275 ETV5 JASPAR yes 33436096
chr1 178636265 178636275 GABPA JASPAR yes 33436097
chr1 178636265 178636276 ETV2 JASPAR yes 33436098
chr1 178636265 178636277 ELF1 JASPAR yes 33436099
chr1 178636265 178636277 ELF4 JASPAR yes 33436100
chr1 178636265 178636278 ELF1 JASPAR yes 33436101
chr1 178636265 178636279 SPI1 JASPAR yes 33436102
chr1 178636265 178636279 SPIC JASPAR yes 33436103
chr1 178636267 178636273 ETS1 JASPAR yes 33436104
chr1 178636267 178636273 SPI1 JASPAR yes 33436105
chr1 178636271 178636284 POU2F2 JASPAR yes 33436106
Genes associated with rs12565333[chr1:178636273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More