EnhancerDB
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  3. rs12565580[chr1:208360302]
Enhancers that have rs12565580[chr1:208360302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12565580[chr1:208360302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208360290 208360303 NR2F1 JASPAR yes 34904924
chr1 208360292 208360307 JUND JASPAR yes 34904925
chr1 208360293 208360306 JUN JASPAR yes 34904926
chr1 208360294 208360302 CREB1 JASPAR yes 34904927
chr1 208360294 208360311 RXRA JASPAR yes 34904928
Genes associated with rs12565580[chr1:208360302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More