EnhancerDB
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  3. rs12566578[chr1:224689785]
Enhancers that have rs12566578[chr1:224689785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12566578[chr1:224689785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224689777 224689790 TFAP2A JASPAR yes 35707668
chr1 224689777 224689790 TFAP2B JASPAR yes 35707669
chr1 224689777 224689790 TFAP2C JASPAR yes 35707670
chr1 224689784 224689797 NFKB2 JASPAR yes 35707671
Genes associated with rs12566578[chr1:224689785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More