EnhancerDB
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  3. rs12568138[chr1:17883860]
Enhancers that have rs12568138[chr1:17883860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12568138[chr1:17883860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17883840 17883861 IRF1 JASPAR yes 27101426
chr1 17883841 17883862 IRF1 JASPAR yes 27101427
chr1 17883842 17883862 RREB1 JASPAR yes 27101429
chr1 17883847 17883867 RREB1 JASPAR yes 27101431
chr1 17883850 17883871 IRF1 JASPAR yes 27101432
chr1 17883852 17883872 RREB1 JASPAR yes 27101433
chr1 17883853 17883867 ONECUT3 JASPAR yes 27101434
chr1 17883855 17883870 RUNX2 JASPAR yes 27101435
chr1 17883856 17883871 MEF2C JASPAR yes 27101436
chr1 17883857 17883877 RREB1 JASPAR yes 27101437
chr1 17883859 17883874 FOXP1 JASPAR yes 27101438
chr1 17883860 17883881 IRF1 JASPAR yes 27101439
Genes associated with rs12568138[chr1:17883860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More